Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 REXO1L8P-201ENST00000604378 1897 ntBASIC18.72■□□□□ 0.59
CBX8Q9HC52 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 LINC01023-201ENST00000606054 436 ntBASIC18.72■□□□□ 0.59
CBX8Q9HC52 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CBX8Q9HC52 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CBX8Q9HC52 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBX8Q9HC52 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CBX8Q9HC52 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CBX8Q9HC52 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 AC112504.1-201ENST00000623415 1841 ntBASIC18.7■□□□□ 0.58
CBX8Q9HC52 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 AC104076.2-201ENST00000448912 469 ntBASIC18.7■□□□□ 0.58
CBX8Q9HC52 AC063952.2-201ENST00000498792 1227 ntBASIC18.7■□□□□ 0.58
CBX8Q9HC52 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 AL590787.1-201ENST00000568856 1315 ntBASIC18.7■□□□□ 0.58
CBX8Q9HC52 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.7■□□□□ 0.58
CBX8Q9HC52 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBX8Q9HC52 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 CDC14C-201ENST00000428251 1719 ntBASIC18.69■□□□□ 0.58
CBX8Q9HC52 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms