Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFCC1Q9HA90 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 AC010336.2-201ENST00000564226 506 ntBASIC19.45■□□□□ 0.7
EFCC1Q9HA90 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 AC005412.3-201ENST00000580309 715 ntBASIC19.45■□□□□ 0.7
EFCC1Q9HA90 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 AC017083.2-201ENST00000608069 979 ntBASIC19.45■□□□□ 0.7
EFCC1Q9HA90 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 AC012569.1-201ENST00000591191 1524 ntBASIC19.45■□□□□ 0.7
EFCC1Q9HA90 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
EFCC1Q9HA90 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 AP000842.3-202ENST00000569238 1080 ntBASIC19.44■□□□□ 0.7
EFCC1Q9HA90 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 AC008267.7-201ENST00000624570 1194 ntBASIC19.44■□□□□ 0.7
EFCC1Q9HA90 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFCC1Q9HA90 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 AC138969.3-201ENST00000546612 1459 ntBASIC19.43■□□□□ 0.7
EFCC1Q9HA90 AC138932.2-201ENST00000548268 1459 ntBASIC19.43■□□□□ 0.7
EFCC1Q9HA90 AC126755.4-201ENST00000549796 1459 ntBASIC19.43■□□□□ 0.7
EFCC1Q9HA90 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 RPS2P32-201ENST00000439199 892 ntBASIC19.43■□□□□ 0.7
EFCC1Q9HA90 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.43■□□□□ 0.7
EFCC1Q9HA90 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms