Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 MIR943-201ENST00000401286 94 ntBASIC19.45■□□□□ 0.7
SH2D4AQ9H788 BASP1P1-201ENST00000430708 665 ntBASIC19.45■□□□□ 0.7
SH2D4AQ9H788 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.45■□□□□ 0.7
SH2D4AQ9H788 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 AC055876.3-201ENST00000431496 288 ntBASIC19.44■□□□□ 0.7
SH2D4AQ9H788 AP002490.2-201ENST00000524791 560 ntBASIC19.44■□□□□ 0.7
SH2D4AQ9H788 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 AC138649.4-201ENST00000612222 287 ntBASIC19.44■□□□□ 0.7
SH2D4AQ9H788 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 PCDHA12-202ENST00000613593 2588 ntBASIC19.44■□□□□ 0.7
SH2D4AQ9H788 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 AC008677.1-201ENST00000519230 1561 ntBASIC19.44■□□□□ 0.7
SH2D4AQ9H788 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.44■□□□□ 0.7
SH2D4AQ9H788 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 AC073389.1-201ENST00000595595 795 ntBASIC19.43■□□□□ 0.7
SH2D4AQ9H788 AJ011932.1-201ENST00000621707 465 ntBASIC19.43■□□□□ 0.7
SH2D4AQ9H788 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D4AQ9H788 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SH2D4AQ9H788 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH2D4AQ9H788 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.42■□□□□ 0.7
SH2D4AQ9H788 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH2D4AQ9H788 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SH2D4AQ9H788 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH2D4AQ9H788 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SH2D4AQ9H788 AL138918.1-201ENST00000568306 659 ntBASIC19.42■□□□□ 0.7
SH2D4AQ9H788 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms