Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 ME2P1-201ENST00000426028 1970 ntBASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 AC132872.4-202ENST00000622924 2756 ntBASIC20■□□□□ 0.79
UPF3BQ9BZI7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 AL805961.1-202ENST00000641562 540 ntBASIC20■□□□□ 0.79
UPF3BQ9BZI7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20■□□□□ 0.79
UPF3BQ9BZI7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF3BQ9BZI7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 LAGE3P1-201ENST00000425356 484 ntBASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 MPDU1-223ENST00000582151 728 ntBASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.99■□□□□ 0.79
UPF3BQ9BZI7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 SLC22A20-204ENST00000530038 1673 ntBASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms