Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 RARRES2P9-201ENST00000565168 469 ntBASIC17.38■□□□□ 0.37
LRRC3Q9BY71 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 AL390754.1-201ENST00000619088 582 ntBASIC17.38■□□□□ 0.37
LRRC3Q9BY71 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC3Q9BY71 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 AC009053.2-201ENST00000563701 2365 ntBASIC17.37■□□□□ 0.37
LRRC3Q9BY71 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 AC236430.1-201ENST00000402231 743 ntBASIC17.37■□□□□ 0.37
LRRC3Q9BY71 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 AC002472.2-201ENST00000442739 958 ntBASIC17.37■□□□□ 0.37
LRRC3Q9BY71 TSPY16P-201ENST00000449843 468 ntBASIC17.37■□□□□ 0.37
LRRC3Q9BY71 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 AC018529.1-201ENST00000613063 361 ntBASIC17.37■□□□□ 0.37
LRRC3Q9BY71 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC3Q9BY71 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms