Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 AC233702.3-201ENST00000578656 1387 ntBASIC10.05□□□□□ -0.8
LIMD2Q9BT23 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 CCS-201ENST00000310190 942 ntTSL 5 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 POM121L3P-201ENST00000419331 1163 ntBASIC10.05□□□□□ -0.8
LIMD2Q9BT23 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 TOB2P1-201ENST00000469761 992 ntBASIC10.05□□□□□ -0.8
LIMD2Q9BT23 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 CIB2-208ENST00000560618 804 ntTSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
LIMD2Q9BT23 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 FUT8-AS1-201ENST00000621019 1521 ntBASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 THAP5-204ENST00000438865 868 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 KRT17P6-201ENST00000453795 1220 ntBASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 AC074051.2-201ENST00000565115 352 ntBASIC10.04□□□□□ -0.8
LIMD2Q9BT23 AC012615.1-201ENST00000565797 1299 ntBASIC10.04□□□□□ -0.8
LIMD2Q9BT23 STK25P1-201ENST00000585406 838 ntBASIC10.04□□□□□ -0.8
LIMD2Q9BT23 AC005336.2-201ENST00000593183 939 ntBASIC10.04□□□□□ -0.8
LIMD2Q9BT23 AC011467.2-201ENST00000598425 242 ntBASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 AC019129.2-201ENST00000609837 1235 ntBASIC10.04□□□□□ -0.8
LIMD2Q9BT23 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms