Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CDCA3Q99618 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.21■□□□□ 0.35
CDCA3Q99618 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.21■□□□□ 0.35
CDCA3Q99618 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDCA3Q99618 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.21■□□□□ 0.35
CDCA3Q99618 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.21■□□□□ 0.35
CDCA3Q99618 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CDCA3Q99618 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.21■□□□□ 0.35
CDCA3Q99618 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.21■□□□□ 0.35
CDCA3Q99618 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CDCA3Q99618 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.21■□□□□ 0.35
CDCA3Q99618 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.21■□□□□ 0.35
CDCA3Q99618 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.21■□□□□ 0.35
CDCA3Q99618 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CDCA3Q99618 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.21■□□□□ 0.35
CDCA3Q99618 AC092337.1-201ENST00000568699 1129 ntBASIC17.21■□□□□ 0.35
CDCA3Q99618 CTBP2P3-201ENST00000585629 1255 ntBASIC17.21■□□□□ 0.35
CDCA3Q99618 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.21■□□□□ 0.35
CDCA3Q99618 AC015936.2-201ENST00000593177 259 ntBASIC17.21■□□□□ 0.35
CDCA3Q99618 TMEM261P1-201ENST00000604899 340 ntBASIC17.21■□□□□ 0.35
CDCA3Q99618 AC133552.6-201ENST00000613406 534 ntBASIC17.21■□□□□ 0.35
CDCA3Q99618 COX11-210ENST00000639671 696 ntBASIC17.21■□□□□ 0.35
CDCA3Q99618 AL139011.1-202ENST00000642063 584 ntBASIC17.21■□□□□ 0.35
CDCA3Q99618 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.21■□□□□ 0.35
CDCA3Q99618 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CDCA3Q99618 AC004408.2-201ENST00000623613 2777 ntBASIC17.21■□□□□ 0.35
CDCA3Q99618 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDCA3Q99618 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDCA3Q99618 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDCA3Q99618 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDCA3Q99618 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDCA3Q99618 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.2■□□□□ 0.34
CDCA3Q99618 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDCA3Q99618 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.2■□□□□ 0.34
CDCA3Q99618 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.2■□□□□ 0.34
CDCA3Q99618 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDCA3Q99618 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CDCA3Q99618 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.2■□□□□ 0.34
CDCA3Q99618 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.2■□□□□ 0.34
CDCA3Q99618 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.2■□□□□ 0.34
CDCA3Q99618 AL139010.1-201ENST00000454878 894 ntBASIC17.2■□□□□ 0.34
CDCA3Q99618 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.2■□□□□ 0.34
CDCA3Q99618 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.2■□□□□ 0.34
CDCA3Q99618 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDCA3Q99618 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.2■□□□□ 0.34
CDCA3Q99618 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.2■□□□□ 0.34
CDCA3Q99618 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.2■□□□□ 0.34
CDCA3Q99618 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CDCA3Q99618 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 SNX33P1-201ENST00000592116 1762 ntBASIC17.2■□□□□ 0.34
CDCA3Q99618 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDCA3Q99618 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.19■□□□□ 0.34
CDCA3Q99618 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CDCA3Q99618 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDCA3Q99618 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDCA3Q99618 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.19■□□□□ 0.34
CDCA3Q99618 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.19■□□□□ 0.34
CDCA3Q99618 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.19■□□□□ 0.34
CDCA3Q99618 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDCA3Q99618 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.19■□□□□ 0.34
CDCA3Q99618 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.19■□□□□ 0.34
CDCA3Q99618 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.19■□□□□ 0.34
CDCA3Q99618 KRT223P-202ENST00000449164 1292 ntBASIC17.19■□□□□ 0.34
CDCA3Q99618 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.19■□□□□ 0.34
CDCA3Q99618 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.19■□□□□ 0.34
CDCA3Q99618 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.19■□□□□ 0.34
CDCA3Q99618 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.19■□□□□ 0.34
CDCA3Q99618 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms