Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 DFFBP1-201ENST00000433250 979 ntBASIC16.91■□□□□ 0.3
PHOX2BQ99453 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHOX2BQ99453 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PHOX2BQ99453 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AL583810.1-201ENST00000553344 1045 ntBASIC16.9■□□□□ 0.3
PHOX2BQ99453 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AC027307.2-201ENST00000591252 911 ntBASIC16.9■□□□□ 0.3
PHOX2BQ99453 AL844908.2-201ENST00000609461 460 ntBASIC16.9■□□□□ 0.3
PHOX2BQ99453 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AC004790.1-201ENST00000612686 536 ntBASIC16.9■□□□□ 0.3
PHOX2BQ99453 AC007431.3-201ENST00000623221 587 ntBASIC16.9■□□□□ 0.3
PHOX2BQ99453 AC124067.4-201ENST00000519691 2379 ntBASIC16.9■□□□□ 0.3
PHOX2BQ99453 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PHOX2BQ99453 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHOX2BQ99453 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PHOX2BQ99453 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PHOX2BQ99453 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms