Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 AL603756.1-201ENST00000606511 2163 ntBASIC17.22■□□□□ 0.35
RPRD1AQ96P16 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 AC099522.2-201ENST00000607001 744 ntBASIC17.22■□□□□ 0.35
RPRD1AQ96P16 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 AL691403.2-201ENST00000618460 490 ntBASIC17.22■□□□□ 0.35
RPRD1AQ96P16 AL161645.1-201ENST00000622716 1255 ntBASIC17.22■□□□□ 0.35
RPRD1AQ96P16 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 SNX33P1-201ENST00000592116 1762 ntBASIC17.21■□□□□ 0.35
RPRD1AQ96P16 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 AC004967.1-201ENST00000453589 447 ntBASIC17.21■□□□□ 0.35
RPRD1AQ96P16 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.21■□□□□ 0.35
RPRD1AQ96P16 AC021097.1-201ENST00000607902 574 ntBASIC17.21■□□□□ 0.35
RPRD1AQ96P16 AC134684.3-201ENST00000641758 218 ntBASIC17.21■□□□□ 0.35
RPRD1AQ96P16 AC106886.4-201ENST00000623557 2502 ntBASIC17.21■□□□□ 0.35
RPRD1AQ96P16 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPRD1AQ96P16 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RPRD1AQ96P16 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RPRD1AQ96P16 KRT8P39-201ENST00000396270 1433 ntBASIC17.21■□□□□ 0.34
RPRD1AQ96P16 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RPRD1AQ96P16 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RPRD1AQ96P16 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.21■□□□□ 0.34
RPRD1AQ96P16 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPRD1AQ96P16 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RPRD1AQ96P16 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPRD1AQ96P16 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPRD1AQ96P16 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPRD1AQ96P16 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPRD1AQ96P16 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.2■□□□□ 0.34
RPRD1AQ96P16 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms