Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
DDX11Q96FC9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
DDX11Q96FC9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 AP006288.1-201ENST00000446065 395 ntBASIC19.89■□□□□ 0.77
DDX11Q96FC9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 SNHG9-202ENST00000564014 471 ntBASIC19.89■□□□□ 0.77
DDX11Q96FC9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 MIR4469-201ENST00000583919 79 ntBASIC19.89■□□□□ 0.77
DDX11Q96FC9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 C20orf181-201ENST00000623918 480 ntBASIC19.89■□□□□ 0.77
DDX11Q96FC9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX11Q96FC9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DDX11Q96FC9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 AP002414.1-201ENST00000391405 1147 ntBASIC19.88■□□□□ 0.77
DDX11Q96FC9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 ALG1L5P-201ENST00000482043 771 ntBASIC19.88■□□□□ 0.77
DDX11Q96FC9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 DUX4L17-201ENST00000557360 1267 ntBASIC19.88■□□□□ 0.77
DDX11Q96FC9 AC027796.2-201ENST00000575326 344 ntBASIC19.88■□□□□ 0.77
DDX11Q96FC9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX11Q96FC9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX11Q96FC9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 PCDH8P1-201ENST00000428983 2773 ntBASIC19.87■□□□□ 0.77
DDX11Q96FC9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX11Q96FC9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX11Q96FC9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms