Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 AL671710.1-201ENST00000610245 2349 ntBASIC17.71■□□□□ 0.43
TRIM11Q96F44 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM11Q96F44 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM11Q96F44 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM11Q96F44 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM11Q96F44 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TRIM11Q96F44 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 AL031731.1-201ENST00000642131 2094 ntBASIC17.7■□□□□ 0.42
TRIM11Q96F44 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 TP73-AS1-207ENST00000624167 988 ntBASIC17.7■□□□□ 0.42
TRIM11Q96F44 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 AC026691.1-201ENST00000602502 2017 ntBASIC17.7■□□□□ 0.42
TRIM11Q96F44 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM11Q96F44 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM11Q96F44 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 MRPL20P1-201ENST00000400819 433 ntBASIC17.69■□□□□ 0.42
TRIM11Q96F44 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 EMBP1-201ENST00000458200 901 ntBASIC17.69■□□□□ 0.42
TRIM11Q96F44 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 GGT4P-201ENST00000623672 1708 ntBASIC17.69■□□□□ 0.42
TRIM11Q96F44 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM11Q96F44 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM11Q96F44 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms