Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 KRT8P10-201ENST00000450021 1447 ntBASIC14.89□□□□□ -0.03
RFT1Q96AA3 AC067930.6-201ENST00000623257 4947 ntBASIC14.89□□□□□ -0.03
RFT1Q96AA3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.89□□□□□ -0.03
RFT1Q96AA3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 AC111152.3-201ENST00000569699 673 ntBASIC14.88□□□□□ -0.03
RFT1Q96AA3 AC090616.6-201ENST00000582640 721 ntBASIC14.88□□□□□ -0.03
RFT1Q96AA3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 AL138831.2-201ENST00000606564 490 ntBASIC14.88□□□□□ -0.03
RFT1Q96AA3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFT1Q96AA3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFT1Q96AA3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms