Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 AL135999.2-201ENST00000622438 1686 ntBASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 AC003669.1-201ENST00000334569 611 ntBASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 KLF4P1-201ENST00000412782 1185 ntBASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 KRT16P4-201ENST00000453883 522 ntBASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 STK19B-204ENST00000512515 211 ntBASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 MIR5100-201ENST00000579544 119 ntBASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 AC073592.5-201ENST00000624854 528 ntBASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RTN4IP1Q8WWV3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RTN4IP1Q8WWV3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
RTN4IP1Q8WWV3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 AC132938.5-201ENST00000624980 1813 ntBASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 NUS1P1-201ENST00000446295 882 ntBASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 FOSL1P1-201ENST00000511041 816 ntBASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 AL591684.3-201ENST00000605187 298 ntBASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 NORAD-201ENST00000565493 5339 ntBASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTN4IP1Q8WWV3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms