Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 AC092658.1-201ENST00000505836 891 ntBASIC20.1■□□□□ 0.81
SNED1Q8TER0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SNED1Q8TER0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SNED1Q8TER0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.09■□□□□ 0.81
SNED1Q8TER0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.09■□□□□ 0.81
SNED1Q8TER0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.09■□□□□ 0.81
SNED1Q8TER0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNED1Q8TER0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNED1Q8TER0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.08■□□□□ 0.81
SNED1Q8TER0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNED1Q8TER0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNED1Q8TER0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.08■□□□□ 0.81
SNED1Q8TER0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNED1Q8TER0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
SNED1Q8TER0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SNED1Q8TER0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNED1Q8TER0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNED1Q8TER0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 SERBP1P3-201ENST00000459980 809 ntBASIC20.08■□□□□ 0.8
SNED1Q8TER0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 LINC02012-201ENST00000608206 1725 ntBASIC20.08■□□□□ 0.8
SNED1Q8TER0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SNED1Q8TER0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SNED1Q8TER0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNED1Q8TER0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNED1Q8TER0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNED1Q8TER0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNED1Q8TER0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNED1Q8TER0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNED1Q8TER0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNED1Q8TER0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNED1Q8TER0 AC008735.3-201ENST00000596646 500 ntBASIC20.07■□□□□ 0.8
SNED1Q8TER0 WFDC1-204ENST00000613603 549 ntBASIC20.07■□□□□ 0.8
SNED1Q8TER0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.07■□□□□ 0.8
SNED1Q8TER0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNED1Q8TER0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SNED1Q8TER0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 KRT8P39-201ENST00000396270 1433 ntBASIC20.06■□□□□ 0.8
SNED1Q8TER0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 TUBB8P12-201ENST00000308911 1335 ntBASIC20.06■□□□□ 0.8
SNED1Q8TER0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 TUBB7P-202ENST00000428444 1305 ntBASIC20.06■□□□□ 0.8
SNED1Q8TER0 TUBB8P7-204ENST00000567960 1332 ntBASIC20.06■□□□□ 0.8
SNED1Q8TER0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 TPRX2P-201ENST00000535362 881 ntBASIC20.06■□□□□ 0.8
SNED1Q8TER0 AC123567.1-201ENST00000548294 1261 ntBASIC20.06■□□□□ 0.8
SNED1Q8TER0 AL391069.4-201ENST00000609583 481 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms