Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AP001350.2-201ENST00000625104 1094 ntBASIC15.68■□□□□ 0.1
NUP43Q8NFH3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.68■□□□□ 0.1
NUP43Q8NFH3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NUP43Q8NFH3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NUP43Q8NFH3 AL671710.1-201ENST00000610245 2349 ntBASIC15.68■□□□□ 0.1
NUP43Q8NFH3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
NUP43Q8NFH3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUP43Q8NFH3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUP43Q8NFH3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUP43Q8NFH3 KRT8P39-201ENST00000396270 1433 ntBASIC15.68■□□□□ 0.1
NUP43Q8NFH3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUP43Q8NFH3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.67■□□□□ 0.1
NUP43Q8NFH3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 AL662844.4-201ENST00000606367 2838 ntBASIC15.67■□□□□ 0.1
NUP43Q8NFH3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 MRPL3P1-201ENST00000400109 1033 ntBASIC15.67■□□□□ 0.1
NUP43Q8NFH3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.67■□□□□ 0.1
NUP43Q8NFH3 TPM4P1-201ENST00000436100 807 ntBASIC15.67■□□□□ 0.1
NUP43Q8NFH3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 AC087641.1-201ENST00000557561 1021 ntBASIC15.67■□□□□ 0.1
NUP43Q8NFH3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
NUP43Q8NFH3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 HCG4-201ENST00000418983 998 ntBASIC15.66■□□□□ 0.1
NUP43Q8NFH3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 AC098831.1-202ENST00000438821 336 ntBASIC15.66■□□□□ 0.1
NUP43Q8NFH3 AC108751.1-201ENST00000490852 363 ntBASIC15.66■□□□□ 0.1
NUP43Q8NFH3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 AP001005.1-201ENST00000571755 1248 ntBASIC15.66■□□□□ 0.1
NUP43Q8NFH3 OR7E47P-204ENST00000575924 449 ntBASIC15.66■□□□□ 0.1
NUP43Q8NFH3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.66■□□□□ 0.1
NUP43Q8NFH3 AC010654.1-201ENST00000615722 808 ntBASIC15.66■□□□□ 0.1
NUP43Q8NFH3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 AC116407.3-201ENST00000623905 1129 ntBASIC15.66■□□□□ 0.1
NUP43Q8NFH3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUP43Q8NFH3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms