Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS37AQ8NEZ2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS37AQ8NEZ2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS37AQ8NEZ2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 NORAD-201ENST00000565493 5339 ntBASIC16■□□□□ 0.15
VPS37AQ8NEZ2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16■□□□□ 0.15
VPS37AQ8NEZ2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 AL513523.2-202ENST00000427283 2040 ntBASIC16■□□□□ 0.15
VPS37AQ8NEZ2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 TOP3BP1-201ENST00000420768 1380 ntBASIC16■□□□□ 0.15
VPS37AQ8NEZ2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS37AQ8NEZ2 AL662844.4-201ENST00000606367 2838 ntBASIC16■□□□□ 0.15
VPS37AQ8NEZ2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 NKAPP1-205ENST00000585790 367 ntBASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS37AQ8NEZ2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 ARMC10P1-201ENST00000313754 855 ntBASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VPS37AQ8NEZ2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms