Protein–RNA interactions for Protein: Q8N3J3

C17orf53, Uncharacterized protein C17orf53, humanhuman

Predicted RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C17orf53Q8N3J3 AC107956.1-201ENST00000494359 873 ntBASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 STK25P1-201ENST00000585406 838 ntBASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C17orf53Q8N3J3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 AC006486.2-201ENST00000624246 2199 ntBASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 KRT18P48-201ENST00000434763 852 ntBASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.31■□□□□ 0.52
C17orf53Q8N3J3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 UBE2SP1-201ENST00000450587 669 ntBASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 FITM1-202ENST00000559294 800 ntBASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 GCSHP2-201ENST00000560971 527 ntBASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 MIR4651-201ENST00000582622 73 ntBASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 AL136038.4-201ENST00000603606 1261 ntBASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 AL049637.2-201ENST00000641778 930 ntBASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C17orf53Q8N3J3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C17orf53Q8N3J3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
C17orf53Q8N3J3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C17orf53Q8N3J3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.29■□□□□ 0.52
C17orf53Q8N3J3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C17orf53Q8N3J3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C17orf53Q8N3J3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
C17orf53Q8N3J3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
C17orf53Q8N3J3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms