Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 AC046158.3-201ENST00000624947 2558 ntBASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 PMS2P1-201ENST00000431037 1228 ntBASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 RPS2P1-201ENST00000434010 821 ntBASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 LINC01711-201ENST00000598340 967 ntBASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC83Q8IWF9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 SLC22A20-204ENST00000530038 1673 ntBASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 AL031731.1-201ENST00000642131 2094 ntBASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 AC107918.2-201ENST00000530817 355 ntBASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 AC006557.2-201ENST00000592985 1240 ntBASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 AC132872.4-202ENST00000622924 2756 ntBASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC83Q8IWF9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 KRT18P27-201ENST00000427733 1299 ntBASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 RPS15P9-201ENST00000494093 319 ntBASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC83Q8IWF9 GGT4P-201ENST00000623672 1708 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms