Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RFX6Q8HWS3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX6Q8HWS3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX6Q8HWS3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 MPDU1-223ENST00000582151 728 ntBASIC17.44■□□□□ 0.38
RFX6Q8HWS3 REXO1L3P-201ENST00000622202 1288 ntBASIC17.44■□□□□ 0.38
RFX6Q8HWS3 TP73-AS1-207ENST00000624167 988 ntBASIC17.44■□□□□ 0.38
RFX6Q8HWS3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.44■□□□□ 0.38
RFX6Q8HWS3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 KRT18P27-201ENST00000427733 1299 ntBASIC17.43■□□□□ 0.38
RFX6Q8HWS3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 FAM197Y8-203ENST00000450145 560 ntBASIC17.43■□□□□ 0.38
RFX6Q8HWS3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 AL139011.1-202ENST00000642063 584 ntBASIC17.43■□□□□ 0.38
RFX6Q8HWS3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RFX6Q8HWS3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 AC073621.1-201ENST00000392730 636 ntBASIC17.42■□□□□ 0.38
RFX6Q8HWS3 AC136632.2-201ENST00000512891 861 ntBASIC17.42■□□□□ 0.38
RFX6Q8HWS3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 MIR1199-201ENST00000621445 119 ntBASIC17.42■□□□□ 0.38
RFX6Q8HWS3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms