Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF44Q7L0R7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF44Q7L0R7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.04■□□□□ 0.16
RNF44Q7L0R7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 FAM58CP-201ENST00000435741 640 ntBASIC16.04■□□□□ 0.16
RNF44Q7L0R7 AC112191.1-201ENST00000523689 701 ntBASIC16.04■□□□□ 0.16
RNF44Q7L0R7 AC109635.5-201ENST00000533593 962 ntBASIC16.04■□□□□ 0.16
RNF44Q7L0R7 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.04■□□□□ 0.16
RNF44Q7L0R7 AL031055.1-201ENST00000606362 631 ntBASIC16.04■□□□□ 0.16
RNF44Q7L0R7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF44Q7L0R7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 AC002056.1-201ENST00000395613 760 ntBASIC16.03■□□□□ 0.16
RNF44Q7L0R7 MIR1233-2-201ENST00000408138 82 ntBASIC16.03■□□□□ 0.16
RNF44Q7L0R7 MIR1233-1-201ENST00000408722 82 ntBASIC16.03■□□□□ 0.16
RNF44Q7L0R7 HTR5BP-201ENST00000430851 1154 ntBASIC16.03■□□□□ 0.16
RNF44Q7L0R7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 AC112482.1-201ENST00000492080 688 ntBASIC16.03■□□□□ 0.16
RNF44Q7L0R7 YBX1P5-201ENST00000509441 847 ntBASIC16.03■□□□□ 0.16
RNF44Q7L0R7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 AL009183.1-201ENST00000603760 355 ntBASIC16.03■□□□□ 0.16
RNF44Q7L0R7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 AL391256.1-201ENST00000443260 1855 ntBASIC16.03■□□□□ 0.16
RNF44Q7L0R7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF44Q7L0R7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 AC105020.1-201ENST00000435356 2205 ntBASIC16.02■□□□□ 0.16
RNF44Q7L0R7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF44Q7L0R7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms