Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 AC011498.5-201ENST00000592027 486 ntBASIC14.69□□□□□ -0.06
C11orf88Q6PI97 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 AL157888.1-201ENST00000631930 593 ntBASIC14.69□□□□□ -0.06
C11orf88Q6PI97 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.68□□□□□ -0.06
C11orf88Q6PI97 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
C11orf88Q6PI97 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms