Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.83■□□□□ 0.77
CTR9Q6PD62 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTR9Q6PD62 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTR9Q6PD62 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTR9Q6PD62 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.83■□□□□ 0.77
CTR9Q6PD62 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTR9Q6PD62 KRT8P39-201ENST00000396270 1433 ntBASIC19.83■□□□□ 0.76
CTR9Q6PD62 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CTR9Q6PD62 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.83■□□□□ 0.76
CTR9Q6PD62 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 METTL21AP1-201ENST00000438852 635 ntBASIC19.82■□□□□ 0.76
CTR9Q6PD62 AL592309.1-201ENST00000443127 649 ntBASIC19.82■□□□□ 0.76
CTR9Q6PD62 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 AC021097.1-201ENST00000607902 574 ntBASIC19.82■□□□□ 0.76
CTR9Q6PD62 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 AC080080.1-201ENST00000625121 2420 ntBASIC19.82■□□□□ 0.76
CTR9Q6PD62 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTR9Q6PD62 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CTR9Q6PD62 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 AL627223.1-201ENST00000416693 442 ntBASIC19.81■□□□□ 0.76
CTR9Q6PD62 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 AC069335.1-201ENST00000489972 472 ntBASIC19.81■□□□□ 0.76
CTR9Q6PD62 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTR9Q6PD62 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
CTR9Q6PD62 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms