Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.21■□□□□ 0.19
NIPAL1Q6NVV3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL1Q6NVV3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NIPAL1Q6NVV3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL1Q6NVV3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL1Q6NVV3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL1Q6NVV3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL1Q6NVV3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL1Q6NVV3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NIPAL1Q6NVV3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NIPAL1Q6NVV3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.21■□□□□ 0.18
NIPAL1Q6NVV3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 AC129492.6-201ENST00000611383 1305 ntBASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 RNA5SP415-201ENST00000517246 115 ntBASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 UNC93B6-202ENST00000528242 690 ntBASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 AC120114.3-201ENST00000611923 658 ntBASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.2■□□□□ 0.18
NIPAL1Q6NVV3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 AL591424.1-201ENST00000442569 1213 ntBASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 TUBB7P-202ENST00000428444 1305 ntBASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NIPAL1Q6NVV3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 AC007950.2-201ENST00000615045 2347 ntBASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms