Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.37□□□□□ -0.27
FAM78BQ5VT40 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 AL391256.1-201ENST00000443260 1855 ntBASIC13.37□□□□□ -0.27
FAM78BQ5VT40 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.37□□□□□ -0.27
FAM78BQ5VT40 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 AC099063.4-201ENST00000641099 1602 ntBASIC13.36□□□□□ -0.27
FAM78BQ5VT40 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 FRMD8P1-201ENST00000440433 1524 ntBASIC13.36□□□□□ -0.27
FAM78BQ5VT40 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 AC112907.2-201ENST00000448639 330 ntBASIC13.36□□□□□ -0.27
FAM78BQ5VT40 AC104076.2-201ENST00000448912 469 ntBASIC13.36□□□□□ -0.27
FAM78BQ5VT40 KRT18P38-201ENST00000449496 1282 ntBASIC13.36□□□□□ -0.27
FAM78BQ5VT40 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 RN7SL850P-201ENST00000579959 291 ntBASIC13.36□□□□□ -0.27
FAM78BQ5VT40 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM78BQ5VT40 GPR89P-201ENST00000407924 1495 ntBASIC13.36□□□□□ -0.27
FAM78BQ5VT40 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.35□□□□□ -0.27
FAM78BQ5VT40 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms