Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 AC104076.2-201ENST00000448912 469 ntBASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 AC063952.2-201ENST00000498792 1227 ntBASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 STK19B-204ENST00000512515 211 ntBASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 AC010331.1-201ENST00000611423 582 ntBASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.96□□□□□ -0.18
ANKRD55Q3KP44 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ANKRD55Q3KP44 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ANKRD55Q3KP44 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ANKRD55Q3KP44 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ANKRD55Q3KP44 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ANKRD55Q3KP44 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ANKRD55Q3KP44 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 AC013268.4-201ENST00000637413 2228 ntBASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 FAM8A6P-201ENST00000407496 1135 ntBASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 SPDYE15P-201ENST00000424157 909 ntBASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 AC022616.7-201ENST00000525383 220 ntBASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 AC006011.2-201ENST00000621313 1158 ntBASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 AC011558.1-201ENST00000623459 338 ntBASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 AC022532.1-201ENST00000624563 1728 ntBASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
ANKRD55Q3KP44 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 AL353593.2-201ENST00000602529 1483 ntBASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms