Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 GGT3P-204ENST00000453783 1664 ntBASIC13.21□□□□□ -0.29
CCL20P78556 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.21□□□□□ -0.29
CCL20P78556 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL20P78556 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 AC002310.6-201ENST00000624451 1377 ntBASIC13.21□□□□□ -0.29
CCL20P78556 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL20P78556 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
CCL20P78556 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CCL20P78556 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CCL20P78556 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CCL20P78556 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.21□□□□□ -0.29
CCL20P78556 MTCL1P1-201ENST00000446207 792 ntBASIC13.21□□□□□ -0.29
CCL20P78556 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL20P78556 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.21□□□□□ -0.29
CCL20P78556 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.21□□□□□ -0.29
CCL20P78556 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CCL20P78556 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL20P78556 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CCL20P78556 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL20P78556 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CCL20P78556 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.21□□□□□ -0.3
CCL20P78556 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.21□□□□□ -0.3
CCL20P78556 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL20P78556 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CCL20P78556 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.21□□□□□ -0.3
CCL20P78556 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL20P78556 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.3
CCL20P78556 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL20P78556 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL20P78556 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
CCL20P78556 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CCL20P78556 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 AC005089.1-201ENST00000619486 2241 ntBASIC13.2□□□□□ -0.3
CCL20P78556 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.2□□□□□ -0.3
CCL20P78556 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL20P78556 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL20P78556 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCL20P78556 AC007663.1-201ENST00000438948 1240 ntBASIC13.2□□□□□ -0.3
CCL20P78556 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL20P78556 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL20P78556 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL20P78556 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 AL109954.1-202ENST00000564051 2148 ntBASIC13.2□□□□□ -0.3
CCL20P78556 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL20P78556 AP005242.2-201ENST00000580065 1175 ntBASIC13.2□□□□□ -0.3
CCL20P78556 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL20P78556 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL20P78556 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CCL20P78556 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL20P78556 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL20P78556 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms