Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
IRX3P78415 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.48■□□□□ 0.71
IRX3P78415 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.48■□□□□ 0.71
IRX3P78415 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 C8orf49-201ENST00000525043 1968 ntBASIC19.48■□□□□ 0.71
IRX3P78415 GNAS-203ENST00000306120 1878 ntBASIC19.48■□□□□ 0.71
IRX3P78415 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.48■□□□□ 0.71
IRX3P78415 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.48■□□□□ 0.71
IRX3P78415 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
IRX3P78415 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
IRX3P78415 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.48■□□□□ 0.71
IRX3P78415 MIR3909-201ENST00000579518 119 ntBASIC19.48■□□□□ 0.71
IRX3P78415 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.48■□□□□ 0.71
IRX3P78415 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IRX3P78415 AC103702.1-201ENST00000548801 2630 ntBASIC19.48■□□□□ 0.71
IRX3P78415 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
IRX3P78415 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.48■□□□□ 0.71
IRX3P78415 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.47■□□□□ 0.71
IRX3P78415 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.47■□□□□ 0.71
IRX3P78415 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
IRX3P78415 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
IRX3P78415 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 AC016027.1-202ENST00000607927 1699 ntBASIC19.47■□□□□ 0.71
IRX3P78415 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.47■□□□□ 0.71
IRX3P78415 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
IRX3P78415 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
IRX3P78415 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.47■□□□□ 0.71
IRX3P78415 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.47■□□□□ 0.71
IRX3P78415 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.47■□□□□ 0.71
IRX3P78415 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.47■□□□□ 0.71
IRX3P78415 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.47■□□□□ 0.71
IRX3P78415 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.47■□□□□ 0.71
IRX3P78415 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 AC008761.3-201ENST00000624803 892 ntBASIC19.47■□□□□ 0.71
IRX3P78415 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 OR6D1P-202ENST00000641007 5290 ntBASIC19.47■□□□□ 0.71
IRX3P78415 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
IRX3P78415 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.47■□□□□ 0.71
IRX3P78415 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.47■□□□□ 0.71
IRX3P78415 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.47■□□□□ 0.71
IRX3P78415 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
IRX3P78415 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IRX3P78415 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.47■□□□□ 0.71
IRX3P78415 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.46■□□□□ 0.71
IRX3P78415 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
IRX3P78415 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
IRX3P78415 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.46■□□□□ 0.71
IRX3P78415 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
IRX3P78415 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.46■□□□□ 0.71
IRX3P78415 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
IRX3P78415 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.46■□□□□ 0.71
IRX3P78415 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.46■□□□□ 0.71
IRX3P78415 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.46■□□□□ 0.71
IRX3P78415 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.46■□□□□ 0.71
IRX3P78415 AC097493.3-201ENST00000509725 367 ntBASIC19.46■□□□□ 0.71
IRX3P78415 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.46■□□□□ 0.71
IRX3P78415 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.46■□□□□ 0.71
IRX3P78415 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.46■□□□□ 0.71
IRX3P78415 LINC02560-201ENST00000596379 459 ntBASIC19.46■□□□□ 0.71
IRX3P78415 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.46■□□□□ 0.71
IRX3P78415 AC012645.4-201ENST00000610691 1061 ntBASIC19.46■□□□□ 0.71
IRX3P78415 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.46■□□□□ 0.71
IRX3P78415 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
IRX3P78415 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 AC063926.2-201ENST00000623766 1308 ntBASIC19.46■□□□□ 0.71
IRX3P78415 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
IRX3P78415 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.46■□□□□ 0.71
IRX3P78415 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IRX3P78415 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms