Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.47■□□□□ 0.39
IRX4P78413 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.47■□□□□ 0.39
IRX4P78413 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.47■□□□□ 0.39
IRX4P78413 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
IRX4P78413 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 AC105020.1-201ENST00000435356 2205 ntBASIC17.47■□□□□ 0.39
IRX4P78413 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.47■□□□□ 0.39
IRX4P78413 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.47■□□□□ 0.39
IRX4P78413 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
IRX4P78413 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.47■□□□□ 0.39
IRX4P78413 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.47■□□□□ 0.39
IRX4P78413 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
IRX4P78413 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.47■□□□□ 0.39
IRX4P78413 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.47■□□□□ 0.39
IRX4P78413 AC106028.4-201ENST00000614509 607 ntBASIC17.47■□□□□ 0.39
IRX4P78413 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.47■□□□□ 0.39
IRX4P78413 AD001527.2-201ENST00000622994 785 ntBASIC17.47■□□□□ 0.39
IRX4P78413 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.47■□□□□ 0.39
IRX4P78413 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.47■□□□□ 0.39
IRX4P78413 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
IRX4P78413 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
IRX4P78413 FLJ38576-201ENST00000623820 2459 ntBASIC17.47■□□□□ 0.39
IRX4P78413 PCDH8P1-201ENST00000428983 2773 ntBASIC17.47■□□□□ 0.39
IRX4P78413 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.47■□□□□ 0.39
IRX4P78413 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
IRX4P78413 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
IRX4P78413 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 AC005915.1-201ENST00000624912 2018 ntBASIC17.47■□□□□ 0.39
IRX4P78413 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.47■□□□□ 0.39
IRX4P78413 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX4P78413 SIGLEC16-201ENST00000599858 1437 ntBASIC17.47■□□□□ 0.39
IRX4P78413 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.46■□□□□ 0.39
IRX4P78413 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 AC008741.2-201ENST00000612792 3115 ntBASIC17.46■□□□□ 0.39
IRX4P78413 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
IRX4P78413 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.46■□□□□ 0.39
IRX4P78413 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.46■□□□□ 0.39
IRX4P78413 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.46■□□□□ 0.39
IRX4P78413 MIR770-201ENST00000390219 98 ntBASIC17.46■□□□□ 0.39
IRX4P78413 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.46■□□□□ 0.39
IRX4P78413 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.46■□□□□ 0.39
IRX4P78413 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.46■□□□□ 0.39
IRX4P78413 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
IRX4P78413 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.46■□□□□ 0.39
IRX4P78413 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.46■□□□□ 0.39
IRX4P78413 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.46■□□□□ 0.39
IRX4P78413 AL078644.1-201ENST00000609881 752 ntBASIC17.46■□□□□ 0.39
IRX4P78413 AL513190.1-201ENST00000621254 727 ntBASIC17.46■□□□□ 0.39
IRX4P78413 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.46■□□□□ 0.39
IRX4P78413 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.46■□□□□ 0.39
IRX4P78413 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IRX4P78413 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
IRX4P78413 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
IRX4P78413 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.46■□□□□ 0.39
IRX4P78413 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.46■□□□□ 0.39
IRX4P78413 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
IRX4P78413 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX4P78413 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
IRX4P78413 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
IRX4P78413 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms