Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 AL603832.2-201ENST00000566195 2125 ntBASIC11.89□□□□□ -0.51
RPL39P62891 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
RPL39P62891 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.89□□□□□ -0.51
RPL39P62891 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RPL39P62891 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.89□□□□□ -0.51
RPL39P62891 SLC25A3P1-201ENST00000443844 931 ntBASIC11.89□□□□□ -0.51
RPL39P62891 HLA-J-202ENST00000469281 1241 ntBASIC11.89□□□□□ -0.51
RPL39P62891 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.89□□□□□ -0.51
RPL39P62891 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.89□□□□□ -0.51
RPL39P62891 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.89□□□□□ -0.51
RPL39P62891 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.89□□□□□ -0.51
RPL39P62891 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
RPL39P62891 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.89□□□□□ -0.51
RPL39P62891 Z83836.1-201ENST00000624605 1642 ntBASIC11.89□□□□□ -0.51
RPL39P62891 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RPL39P62891 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.89□□□□□ -0.51
RPL39P62891 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.89□□□□□ -0.51
RPL39P62891 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RPL39P62891 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 KRT18P22-201ENST00000402024 1347 ntBASIC11.88□□□□□ -0.51
RPL39P62891 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC11.88□□□□□ -0.51
RPL39P62891 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
RPL39P62891 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
RPL39P62891 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 AL356309.3-201ENST00000624132 1934 ntBASIC11.88□□□□□ -0.51
RPL39P62891 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 AC125634.1-201ENST00000438758 1403 ntBASIC11.88□□□□□ -0.51
RPL39P62891 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.88□□□□□ -0.51
RPL39P62891 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 AL365209.1-201ENST00000624418 6473 ntBASIC11.88□□□□□ -0.51
RPL39P62891 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
RPL39P62891 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.88□□□□□ -0.51
RPL39P62891 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
RPL39P62891 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.88□□□□□ -0.51
RPL39P62891 AL031432.5-201ENST00000641059 760 ntBASIC11.88□□□□□ -0.51
RPL39P62891 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 PRAL-201ENST00000624952 3286 ntBASIC11.88□□□□□ -0.51
RPL39P62891 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.88□□□□□ -0.51
RPL39P62891 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 AL353593.2-201ENST00000602529 1483 ntBASIC11.88□□□□□ -0.51
RPL39P62891 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms