Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
UBE2D3P61077 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D3P61077 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D3P61077 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
UBE2D3P61077 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
UBE2D3P61077 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 AL021920.2-201ENST00000624828 1351 ntBASIC11.97□□□□□ -0.49
UBE2D3P61077 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D3P61077 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.97□□□□□ -0.49
UBE2D3P61077 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D3P61077 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D3P61077 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.97□□□□□ -0.49
UBE2D3P61077 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.97□□□□□ -0.49
UBE2D3P61077 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D3P61077 AC099336.1-202ENST00000602961 463 ntBASIC11.97□□□□□ -0.49
UBE2D3P61077 NPAP1P7-201ENST00000613027 823 ntBASIC11.97□□□□□ -0.49
UBE2D3P61077 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.97□□□□□ -0.49
UBE2D3P61077 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D3P61077 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
UBE2D3P61077 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
UBE2D3P61077 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D3P61077 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
UBE2D3P61077 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D3P61077 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D3P61077 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 AC079776.2-201ENST00000641154 1609 ntBASIC11.97□□□□□ -0.49
UBE2D3P61077 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D3P61077 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 AC004817.3-201ENST00000602957 2129 ntBASIC11.96□□□□□ -0.49
UBE2D3P61077 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
UBE2D3P61077 AC007326.2-201ENST00000624224 7579 ntBASIC11.96□□□□□ -0.49
UBE2D3P61077 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.96□□□□□ -0.49
UBE2D3P61077 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 NUS1P2-201ENST00000417358 873 ntBASIC11.96□□□□□ -0.49
UBE2D3P61077 LINC00982-205ENST00000420957 435 ntBASIC11.96□□□□□ -0.49
UBE2D3P61077 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
UBE2D3P61077 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.96□□□□□ -0.49
UBE2D3P61077 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 MIR5100-201ENST00000579544 119 ntBASIC11.96□□□□□ -0.49
UBE2D3P61077 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
UBE2D3P61077 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D3P61077 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D3P61077 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UBE2D3P61077 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UBE2D3P61077 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UBE2D3P61077 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
UBE2D3P61077 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.96□□□□□ -0.5
UBE2D3P61077 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UBE2D3P61077 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.96□□□□□ -0.5
UBE2D3P61077 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.96□□□□□ -0.5
UBE2D3P61077 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
UBE2D3P61077 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.96□□□□□ -0.5
UBE2D3P61077 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms