Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 AC133963.1-201ENST00000504166 1679 ntBASIC19.16■□□□□ 0.66
CHMP4BP1P59074 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 AL139400.1-201ENST00000366220 510 ntBASIC19.15■□□□□ 0.66
CHMP4BP1P59074 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 FAM185BP-201ENST00000443595 716 ntBASIC19.15■□□□□ 0.66
CHMP4BP1P59074 ACTG1P14-201ENST00000446382 1122 ntBASIC19.15■□□□□ 0.66
CHMP4BP1P59074 TIMM8BP1-201ENST00000452384 211 ntBASIC19.15■□□□□ 0.66
CHMP4BP1P59074 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 AP000344.2-201ENST00000512987 629 ntBASIC19.15■□□□□ 0.66
CHMP4BP1P59074 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 AC004835.2-201ENST00000603762 682 ntBASIC19.15■□□□□ 0.66
CHMP4BP1P59074 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 CICP6-201ENST00000457191 2729 ntBASIC19.15■□□□□ 0.66
CHMP4BP1P59074 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CHMP4BP1P59074 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP4BP1P59074 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
CHMP4BP1P59074 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP4BP1P59074 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.14■□□□□ 0.66
CHMP4BP1P59074 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.14■□□□□ 0.66
CHMP4BP1P59074 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 MIR770-201ENST00000390219 98 ntBASIC19.14■□□□□ 0.65
CHMP4BP1P59074 AC004461.1-201ENST00000412461 403 ntBASIC19.14■□□□□ 0.65
CHMP4BP1P59074 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 AC106886.4-201ENST00000623557 2502 ntBASIC19.14■□□□□ 0.65
CHMP4BP1P59074 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms