Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.28■■□□□ 1
BRPF1P55201 AC106028.4-201ENST00000614509 607 ntBASIC21.28■■□□□ 1
BRPF1P55201 AL513190.1-201ENST00000621254 727 ntBASIC21.28■■□□□ 1
BRPF1P55201 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.28■■□□□ 1
BRPF1P55201 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
BRPF1P55201 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRPF1P55201 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRPF1P55201 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.27■■□□□ 1
BRPF1P55201 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRPF1P55201 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRPF1P55201 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
BRPF1P55201 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
BRPF1P55201 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
BRPF1P55201 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
BRPF1P55201 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.27■■□□□ 1
BRPF1P55201 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
BRPF1P55201 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.27■■□□□ 1
BRPF1P55201 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.27■■□□□ 1
BRPF1P55201 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.27■■□□□ 1
BRPF1P55201 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.27■■□□□ 1
BRPF1P55201 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
BRPF1P55201 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
BRPF1P55201 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
BRPF1P55201 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.27■□□□□ 0.99
BRPF1P55201 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
BRPF1P55201 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.26■□□□□ 0.99
BRPF1P55201 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.26■□□□□ 0.99
BRPF1P55201 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 CNN2P11-201ENST00000429351 262 ntBASIC21.26■□□□□ 0.99
BRPF1P55201 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.26■□□□□ 0.99
BRPF1P55201 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.26■□□□□ 0.99
BRPF1P55201 AC074386.1-202ENST00000463561 864 ntBASIC21.26■□□□□ 0.99
BRPF1P55201 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.26■□□□□ 0.99
BRPF1P55201 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
BRPF1P55201 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRPF1P55201 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
BRPF1P55201 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRPF1P55201 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRPF1P55201 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.25■□□□□ 0.99
BRPF1P55201 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.25■□□□□ 0.99
BRPF1P55201 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
BRPF1P55201 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRPF1P55201 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
BRPF1P55201 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
BRPF1P55201 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRPF1P55201 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRPF1P55201 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRPF1P55201 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
BRPF1P55201 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
BRPF1P55201 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
BRPF1P55201 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.25■□□□□ 0.99
BRPF1P55201 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
BRPF1P55201 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.25■□□□□ 0.99
BRPF1P55201 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.25■□□□□ 0.99
BRPF1P55201 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
BRPF1P55201 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
BRPF1P55201 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRPF1P55201 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
BRPF1P55201 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
BRPF1P55201 BCL2-203ENST00000589955 5011 ntBASIC21.25■□□□□ 0.99
BRPF1P55201 AC020765.3-201ENST00000613051 740 ntBASIC21.25■□□□□ 0.99
BRPF1P55201 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.25■□□□□ 0.99
BRPF1P55201 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
BRPF1P55201 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRPF1P55201 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRPF1P55201 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
BRPF1P55201 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRPF1P55201 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms