Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
RAD23BP54727 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RAD23BP54727 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.9■□□□□ 0.46
RAD23BP54727 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.9■□□□□ 0.46
RAD23BP54727 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RAD23BP54727 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.9■□□□□ 0.46
RAD23BP54727 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAD23BP54727 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 AC012569.1-201ENST00000591191 1524 ntBASIC17.9■□□□□ 0.46
RAD23BP54727 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 HMGA1P7-201ENST00000406908 502 ntBASIC17.9■□□□□ 0.46
RAD23BP54727 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAD23BP54727 HCG4-201ENST00000418983 998 ntBASIC17.9■□□□□ 0.46
RAD23BP54727 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.9■□□□□ 0.46
RAD23BP54727 PGAM5P1-201ENST00000518923 814 ntBASIC17.9■□□□□ 0.46
RAD23BP54727 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.9■□□□□ 0.46
RAD23BP54727 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RAD23BP54727 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.9■□□□□ 0.46
RAD23BP54727 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.9■□□□□ 0.46
RAD23BP54727 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.9■□□□□ 0.46
RAD23BP54727 AC092865.6-201ENST00000642101 219 ntBASIC17.9■□□□□ 0.46
RAD23BP54727 AL671710.1-201ENST00000610245 2349 ntBASIC17.9■□□□□ 0.46
RAD23BP54727 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.9■□□□□ 0.46
RAD23BP54727 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RAD23BP54727 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.9■□□□□ 0.46
RAD23BP54727 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.9■□□□□ 0.46
RAD23BP54727 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.9■□□□□ 0.46
RAD23BP54727 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RAD23BP54727 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD23BP54727 AC025580.3-201ENST00000617932 1424 ntBASIC17.89■□□□□ 0.46
RAD23BP54727 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAD23BP54727 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAD23BP54727 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RAD23BP54727 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAD23BP54727 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAD23BP54727 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAD23BP54727 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.89■□□□□ 0.46
RAD23BP54727 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RAD23BP54727 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.89■□□□□ 0.45
RAD23BP54727 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAD23BP54727 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RAD23BP54727 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.89■□□□□ 0.45
RAD23BP54727 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.89■□□□□ 0.45
RAD23BP54727 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAD23BP54727 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.89■□□□□ 0.45
RAD23BP54727 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.89■□□□□ 0.45
RAD23BP54727 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RAD23BP54727 KRT19P2-202ENST00000557173 1012 ntBASIC17.89■□□□□ 0.45
RAD23BP54727 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.89■□□□□ 0.45
RAD23BP54727 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.89■□□□□ 0.45
RAD23BP54727 AC023141.13-201ENST00000604991 943 ntBASIC17.89■□□□□ 0.45
RAD23BP54727 AL513190.1-201ENST00000621254 727 ntBASIC17.89■□□□□ 0.45
RAD23BP54727 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.89■□□□□ 0.45
RAD23BP54727 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAD23BP54727 BCAR1-209ENST00000546196 1340 ntBASIC17.89■□□□□ 0.45
RAD23BP54727 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.89■□□□□ 0.45
RAD23BP54727 FER1L4-210ENST00000615531 5998 ntBASIC17.89■□□□□ 0.45
RAD23BP54727 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
RAD23BP54727 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.89■□□□□ 0.45
RAD23BP54727 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RAD23BP54727 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD23BP54727 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAD23BP54727 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAD23BP54727 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
RAD23BP54727 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAD23BP54727 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.88■□□□□ 0.45
RAD23BP54727 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAD23BP54727 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAD23BP54727 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.88■□□□□ 0.45
RAD23BP54727 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAD23BP54727 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAD23BP54727 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms