Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 CFTRP3-201ENST00000376400 212 ntBASIC16.65■□□□□ 0.26
NUBP1P53384 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC16.65■□□□□ 0.26
NUBP1P53384 ART2BP-201ENST00000453501 499 ntBASIC16.65■□□□□ 0.26
NUBP1P53384 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 CROCCP4-201ENST00000457096 498 ntBASIC16.65■□□□□ 0.26
NUBP1P53384 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 AC137549.1-201ENST00000514243 533 ntBASIC16.65■□□□□ 0.26
NUBP1P53384 FAM92A-204ENST00000517718 827 ntTSL 3 BASIC16.65■□□□□ 0.26
NUBP1P53384 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 OR8K4P-201ENST00000534608 872 ntBASIC16.65■□□□□ 0.26
NUBP1P53384 BANF1P1-201ENST00000553684 263 ntBASIC16.65■□□□□ 0.26
NUBP1P53384 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC16.65■□□□□ 0.26
NUBP1P53384 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 AC233724.13-201ENST00000598383 410 ntBASIC16.65■□□□□ 0.26
NUBP1P53384 WFDC1-204ENST00000613603 549 ntBASIC16.65■□□□□ 0.26
NUBP1P53384 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.65■□□□□ 0.26
NUBP1P53384 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.65■□□□□ 0.26
NUBP1P53384 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.65■□□□□ 0.26
NUBP1P53384 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NUBP1P53384 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC16.64■□□□□ 0.26
NUBP1P53384 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NUBP1P53384 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
NUBP1P53384 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.64■□□□□ 0.25
NUBP1P53384 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
NUBP1P53384 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NUBP1P53384 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.64■□□□□ 0.25
NUBP1P53384 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NUBP1P53384 ZNF885P-201ENST00000420174 1098 ntBASIC16.64■□□□□ 0.25
NUBP1P53384 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC16.64■□□□□ 0.25
NUBP1P53384 LLPH-202ENST00000446587 1177 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
NUBP1P53384 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.64■□□□□ 0.25
NUBP1P53384 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.64■□□□□ 0.25
NUBP1P53384 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.64■□□□□ 0.25
NUBP1P53384 AL512361.1-201ENST00000554200 418 ntBASIC16.64■□□□□ 0.25
NUBP1P53384 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 AL139022.2-201ENST00000606934 443 ntBASIC16.64■□□□□ 0.25
NUBP1P53384 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NUBP1P53384 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.64■□□□□ 0.25
NUBP1P53384 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.64■□□□□ 0.25
NUBP1P53384 AC073592.7-201ENST00000623659 507 ntBASIC16.64■□□□□ 0.25
NUBP1P53384 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC16.64■□□□□ 0.25
NUBP1P53384 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.64■□□□□ 0.25
NUBP1P53384 SLC22A20-204ENST00000530038 1673 ntBASIC16.64■□□□□ 0.25
NUBP1P53384 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NUBP1P53384 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.64■□□□□ 0.25
NUBP1P53384 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms