Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT9P35527 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KRT9P35527 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.36■□□□□ 0.53
KRT9P35527 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT9P35527 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT9P35527 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT9P35527 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT9P35527 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.36■□□□□ 0.53
KRT9P35527 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT9P35527 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
KRT9P35527 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KRT9P35527 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT9P35527 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
KRT9P35527 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
KRT9P35527 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KRT9P35527 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT9P35527 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KRT9P35527 AL356309.3-201ENST00000624132 1934 ntBASIC18.35■□□□□ 0.53
KRT9P35527 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT9P35527 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT9P35527 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT9P35527 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT9P35527 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KRT9P35527 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KRT9P35527 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 LINC00982-205ENST00000420957 435 ntBASIC18.35■□□□□ 0.53
KRT9P35527 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT9P35527 PRYP5-201ENST00000451909 266 ntBASIC18.35■□□□□ 0.53
KRT9P35527 BX005266.1-201ENST00000473402 457 ntBASIC18.35■□□□□ 0.53
KRT9P35527 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KRT9P35527 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT9P35527 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT9P35527 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 AC012313.10-201ENST00000623509 926 ntBASIC18.35■□□□□ 0.53
KRT9P35527 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT9P35527 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT9P35527 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 AL365203.3-201ENST00000609742 2057 ntBASIC18.35■□□□□ 0.53
KRT9P35527 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
KRT9P35527 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KRT9P35527 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT9P35527 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
KRT9P35527 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT9P35527 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
KRT9P35527 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
KRT9P35527 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT9P35527 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT9P35527 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT9P35527 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms