Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN1P35523 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN1P35523 LINC01238-205ENST00000567549 1107 ntBASIC19.09■□□□□ 0.65
CLCN1P35523 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN1P35523 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CLCN1P35523 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLCN1P35523 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCN1P35523 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCN1P35523 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.08■□□□□ 0.65
CLCN1P35523 AC106881.1-201ENST00000605849 3329 ntBASIC19.08■□□□□ 0.65
CLCN1P35523 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLCN1P35523 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCN1P35523 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCN1P35523 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC19.08■□□□□ 0.65
CLCN1P35523 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCN1P35523 AP005117.1-202ENST00000581724 1908 ntBASIC19.08■□□□□ 0.65
CLCN1P35523 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCN1P35523 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLCN1P35523 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC19.08■□□□□ 0.65
CLCN1P35523 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CLCN1P35523 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCN1P35523 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.08■□□□□ 0.65
CLCN1P35523 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.08■□□□□ 0.65
CLCN1P35523 AL031133.1-201ENST00000406807 723 ntBASIC19.08■□□□□ 0.64
CLCN1P35523 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCN1P35523 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC19.08■□□□□ 0.64
CLCN1P35523 MTCL1P1-201ENST00000446207 792 ntBASIC19.08■□□□□ 0.64
CLCN1P35523 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCN1P35523 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCN1P35523 AC124947.2-201ENST00000547118 1133 ntBASIC19.08■□□□□ 0.64
CLCN1P35523 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CLCN1P35523 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCN1P35523 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CLCN1P35523 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCN1P35523 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
CLCN1P35523 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
CLCN1P35523 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCN1P35523 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.08■□□□□ 0.64
CLCN1P35523 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCN1P35523 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCN1P35523 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC19.08■□□□□ 0.64
CLCN1P35523 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
CLCN1P35523 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCN1P35523 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLCN1P35523 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC19.07■□□□□ 0.64
CLCN1P35523 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLCN1P35523 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.07■□□□□ 0.64
CLCN1P35523 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.07■□□□□ 0.64
CLCN1P35523 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.07■□□□□ 0.64
CLCN1P35523 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.07■□□□□ 0.64
CLCN1P35523 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 ME2P1-201ENST00000426028 1970 ntBASIC19.07■□□□□ 0.64
CLCN1P35523 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.07■□□□□ 0.64
CLCN1P35523 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CLCN1P35523 AL645929.1-201ENST00000420084 975 ntBASIC19.07■□□□□ 0.64
CLCN1P35523 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.07■□□□□ 0.64
CLCN1P35523 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.07■□□□□ 0.64
CLCN1P35523 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.07■□□□□ 0.64
CLCN1P35523 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CLCN1P35523 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCN1P35523 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.06■□□□□ 0.64
CLCN1P35523 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CLCN1P35523 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCN1P35523 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
CLCN1P35523 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms