Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFC1P35251 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RFC1P35251 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.66■□□□□ 0.42
RFC1P35251 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RFC1P35251 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 AC093909.1-201ENST00000504731 1122 ntBASIC17.66■□□□□ 0.42
RFC1P35251 IGHV3-22-201ENST00000520721 359 ntBASIC17.66■□□□□ 0.42
RFC1P35251 UNC93B6-202ENST00000528242 690 ntBASIC17.66■□□□□ 0.42
RFC1P35251 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 AC091167.2-201ENST00000579581 588 ntBASIC17.66■□□□□ 0.42
RFC1P35251 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 AL139011.1-202ENST00000642063 584 ntBASIC17.66■□□□□ 0.42
RFC1P35251 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC1P35251 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.65■□□□□ 0.42
RFC1P35251 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
RFC1P35251 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RFC1P35251 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RFC1P35251 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RFC1P35251 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.65■□□□□ 0.42
RFC1P35251 AC108751.1-201ENST00000490852 363 ntBASIC17.65■□□□□ 0.42
RFC1P35251 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.65■□□□□ 0.42
RFC1P35251 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.65■□□□□ 0.42
RFC1P35251 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.65■□□□□ 0.42
RFC1P35251 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.65■□□□□ 0.42
RFC1P35251 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RFC1P35251 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFC1P35251 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC1P35251 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.65■□□□□ 0.42
RFC1P35251 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFC1P35251 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFC1P35251 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFC1P35251 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 AL353732.1-201ENST00000569618 1459 ntBASIC17.64■□□□□ 0.41
RFC1P35251 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.64■□□□□ 0.41
RFC1P35251 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.64■□□□□ 0.41
RFC1P35251 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.64■□□□□ 0.41
RFC1P35251 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 AC009947.1-201ENST00000444350 727 ntBASIC17.64■□□□□ 0.41
RFC1P35251 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 RNA5SP415-201ENST00000517246 115 ntBASIC17.64■□□□□ 0.41
RFC1P35251 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.64■□□□□ 0.41
RFC1P35251 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.64■□□□□ 0.41
RFC1P35251 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RFC1P35251 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.64■□□□□ 0.41
RFC1P35251 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms