Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
MMP11P24347 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP11P24347 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP11P24347 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP11P24347 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP11P24347 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
MMP11P24347 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP11P24347 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP11P24347 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
MMP11P24347 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 RNF216P1-203ENST00000404404 2427 ntBASIC15.89■□□□□ 0.13
MMP11P24347 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MMP11P24347 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
MMP11P24347 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.89■□□□□ 0.13
MMP11P24347 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MMP11P24347 AP000344.2-201ENST00000512987 629 ntBASIC15.89■□□□□ 0.13
MMP11P24347 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.89■□□□□ 0.13
MMP11P24347 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP11P24347 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP11P24347 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MMP11P24347 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.89■□□□□ 0.13
MMP11P24347 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP11P24347 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MMP11P24347 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP11P24347 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MMP11P24347 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP11P24347 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP11P24347 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP11P24347 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP11P24347 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP11P24347 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP11P24347 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP11P24347 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.88■□□□□ 0.13
MMP11P24347 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP11P24347 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 AC092919.2-201ENST00000623631 1645 ntBASIC15.88■□□□□ 0.13
MMP11P24347 AC002056.1-201ENST00000395613 760 ntBASIC15.88■□□□□ 0.13
MMP11P24347 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.88■□□□□ 0.13
MMP11P24347 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.88■□□□□ 0.13
MMP11P24347 AC005412.3-201ENST00000580309 715 ntBASIC15.88■□□□□ 0.13
MMP11P24347 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP11P24347 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP11P24347 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MMP11P24347 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP11P24347 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP11P24347 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP11P24347 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
MMP11P24347 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP11P24347 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP11P24347 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP11P24347 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
MMP11P24347 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP11P24347 EGFEM1P-202ENST00000431685 1563 ntBASIC15.87■□□□□ 0.13
MMP11P24347 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
MMP11P24347 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP11P24347 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP11P24347 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP11P24347 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP11P24347 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.87■□□□□ 0.13
MMP11P24347 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP11P24347 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.87■□□□□ 0.13
MMP11P24347 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP11P24347 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
MMP11P24347 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.87■□□□□ 0.13
MMP11P24347 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.87■□□□□ 0.13
MMP11P24347 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP11P24347 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.87■□□□□ 0.13
MMP11P24347 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.87■□□□□ 0.13
MMP11P24347 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
MMP11P24347 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
MMP11P24347 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP11P24347 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
MMP11P24347 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP11P24347 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP11P24347 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.87■□□□□ 0.13
MMP11P24347 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms