Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPA1P20036 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPA1P20036 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPA1P20036 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPA1P20036 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DPA1P20036 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DPA1P20036 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPA1P20036 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DPA1P20036 AC012569.1-201ENST00000591191 1524 ntBASIC16.91■□□□□ 0.3
HLA-DPA1P20036 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 PCDHA14-201ENST00000506751 2298 ntBASIC16.9■□□□□ 0.3
HLA-DPA1P20036 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 AL590627.1-203ENST00000421194 1026 ntBASIC16.9■□□□□ 0.3
HLA-DPA1P20036 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.9■□□□□ 0.3
HLA-DPA1P20036 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 AC034105.1-201ENST00000563488 319 ntBASIC16.9■□□□□ 0.3
HLA-DPA1P20036 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 MIR4515-201ENST00000584082 81 ntBASIC16.9■□□□□ 0.3
HLA-DPA1P20036 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 BX640515.1-201ENST00000617215 977 ntBASIC16.9■□□□□ 0.3
HLA-DPA1P20036 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPA1P20036 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DPA1P20036 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DPA1P20036 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DPA1P20036 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.89■□□□□ 0.3
HLA-DPA1P20036 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 RPL13AP23-201ENST00000480739 586 ntBASIC16.89■□□□□ 0.29
HLA-DPA1P20036 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 AC096734.2-201ENST00000562054 433 ntBASIC16.89■□□□□ 0.29
HLA-DPA1P20036 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 AC120114.3-201ENST00000611923 658 ntBASIC16.89■□□□□ 0.29
HLA-DPA1P20036 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 AL645728.2-201ENST00000641974 660 ntBASIC16.89■□□□□ 0.29
HLA-DPA1P20036 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPA1P20036 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms