Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.55□□□□□ -0.24
ACANP16112 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ACANP16112 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.55□□□□□ -0.24
ACANP16112 AL355312.1-201ENST00000407115 2176 ntBASIC13.55□□□□□ -0.24
ACANP16112 AC012317.2-201ENST00000623305 2251 ntBASIC13.55□□□□□ -0.24
ACANP16112 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.55□□□□□ -0.24
ACANP16112 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ACANP16112 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.55□□□□□ -0.24
ACANP16112 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.54□□□□□ -0.24
ACANP16112 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.54□□□□□ -0.24
ACANP16112 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.54□□□□□ -0.24
ACANP16112 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.54□□□□□ -0.24
ACANP16112 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.54□□□□□ -0.24
ACANP16112 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.54□□□□□ -0.24
ACANP16112 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.54□□□□□ -0.24
ACANP16112 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.54□□□□□ -0.24
ACANP16112 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.54□□□□□ -0.24
ACANP16112 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ACANP16112 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.54□□□□□ -0.24
ACANP16112 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.54□□□□□ -0.24
ACANP16112 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.54□□□□□ -0.24
ACANP16112 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.54□□□□□ -0.24
ACANP16112 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.54□□□□□ -0.24
ACANP16112 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ACANP16112 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACANP16112 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.54□□□□□ -0.24
ACANP16112 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.53□□□□□ -0.24
ACANP16112 AC006033.1-201ENST00000440505 426 ntBASIC13.53□□□□□ -0.24
ACANP16112 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.53□□□□□ -0.24
ACANP16112 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.53□□□□□ -0.24
ACANP16112 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 AC016629.1-201ENST00000596579 586 ntBASIC13.53□□□□□ -0.24
ACANP16112 AL022328.1-201ENST00000610050 478 ntBASIC13.53□□□□□ -0.24
ACANP16112 AC004461.2-201ENST00000629517 803 ntBASIC13.53□□□□□ -0.24
ACANP16112 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.53□□□□□ -0.24
ACANP16112 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.53□□□□□ -0.24
ACANP16112 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ACANP16112 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ACANP16112 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ACANP16112 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.53□□□□□ -0.24
ACANP16112 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.53□□□□□ -0.24
ACANP16112 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.53□□□□□ -0.24
ACANP16112 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.53□□□□□ -0.24
ACANP16112 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ACANP16112 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACANP16112 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ACANP16112 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.52□□□□□ -0.24
ACANP16112 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ACANP16112 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ACANP16112 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ACANP16112 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.52□□□□□ -0.24
ACANP16112 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.52□□□□□ -0.24
ACANP16112 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ACANP16112 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ACANP16112 AC104457.1-201ENST00000401024 814 ntBASIC13.52□□□□□ -0.24
ACANP16112 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.52□□□□□ -0.24
ACANP16112 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ACANP16112 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ACANP16112 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms