Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
DEFA4P12838 AC003669.1-201ENST00000334569 611 ntBASIC13.7□□□□□ -0.22
DEFA4P12838 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
DEFA4P12838 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.7□□□□□ -0.22
DEFA4P12838 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.7□□□□□ -0.22
DEFA4P12838 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.7□□□□□ -0.22
DEFA4P12838 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
DEFA4P12838 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 AC091607.1-201ENST00000490318 1060 ntBASIC13.7□□□□□ -0.22
DEFA4P12838 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.7□□□□□ -0.22
DEFA4P12838 KRT18P35-201ENST00000510488 1269 ntBASIC13.7□□□□□ -0.22
DEFA4P12838 TPSP2-201ENST00000561760 610 ntBASIC13.7□□□□□ -0.22
DEFA4P12838 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
DEFA4P12838 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
DEFA4P12838 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
DEFA4P12838 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA4P12838 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA4P12838 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.69□□□□□ -0.22
DEFA4P12838 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
DEFA4P12838 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.69□□□□□ -0.22
DEFA4P12838 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.69□□□□□ -0.22
DEFA4P12838 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
DEFA4P12838 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.69□□□□□ -0.22
DEFA4P12838 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.69□□□□□ -0.22
DEFA4P12838 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.69□□□□□ -0.22
DEFA4P12838 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA4P12838 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA4P12838 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.69□□□□□ -0.22
DEFA4P12838 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.69□□□□□ -0.22
DEFA4P12838 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.69□□□□□ -0.22
DEFA4P12838 AP005901.3-202ENST00000581653 237 ntBASIC13.69□□□□□ -0.22
DEFA4P12838 STK25P1-201ENST00000585406 838 ntBASIC13.69□□□□□ -0.22
DEFA4P12838 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 AC092329.2-201ENST00000598402 547 ntBASIC13.69□□□□□ -0.22
DEFA4P12838 AC093458.2-201ENST00000623150 629 ntBASIC13.69□□□□□ -0.22
DEFA4P12838 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.69□□□□□ -0.22
DEFA4P12838 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
DEFA4P12838 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA4P12838 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
DEFA4P12838 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.69□□□□□ -0.22
DEFA4P12838 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA4P12838 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DEFA4P12838 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA4P12838 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA4P12838 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DEFA4P12838 AL353593.2-201ENST00000602529 1483 ntBASIC13.68□□□□□ -0.22
DEFA4P12838 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DEFA4P12838 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DEFA4P12838 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms