Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 AC087499.6-201ENST00000411576 835 ntBASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 DOC2GP-202ENST00000514950 1163 ntBASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 AC132938.2-201ENST00000579188 680 ntBASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 AC008494.3-201ENST00000606615 944 ntBASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 AL591163.1-201ENST00000641757 987 ntBASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSB-PGBD3P0DP91 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 AL512384.1-201ENST00000406683 331 ntBASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 AC017083.2-201ENST00000608069 979 ntBASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 BTBD7P1-201ENST00000447253 1453 ntBASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22■■□□□ 1.11
CSB-PGBD3P0DP91 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 WASH4P-201ENST00000564273 1246 ntBASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 CHCHD2P3-201ENST00000603038 451 ntBASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.99■■□□□ 1.11
CSB-PGBD3P0DP91 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms