Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALM3P0DP25 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CALM3P0DP25 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.41■□□□□ 0.7
CALM3P0DP25 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 GGT4P-201ENST00000623672 1708 ntBASIC19.4■□□□□ 0.7
CALM3P0DP25 GPAA1P2-202ENST00000606848 1787 ntBASIC19.4■□□□□ 0.7
CALM3P0DP25 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CALM3P0DP25 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CALM3P0DP25 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CALM3P0DP25 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CALM3P0DP25 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 BX842568.4-201ENST00000421222 227 ntBASIC19.4■□□□□ 0.7
CALM3P0DP25 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.4■□□□□ 0.7
CALM3P0DP25 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CALM3P0DP25 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.4■□□□□ 0.7
CALM3P0DP25 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CALM3P0DP25 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CALM3P0DP25 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CALM3P0DP25 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CALM3P0DP25 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.4■□□□□ 0.7
CALM3P0DP25 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.4■□□□□ 0.7
CALM3P0DP25 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.4■□□□□ 0.7
CALM3P0DP25 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALM3P0DP25 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CALM3P0DP25 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CALM3P0DP25 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CALM3P0DP25 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.39■□□□□ 0.7
CALM3P0DP25 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CALM3P0DP25 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CALM3P0DP25 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.39■□□□□ 0.69
CALM3P0DP25 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.39■□□□□ 0.69
CALM3P0DP25 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 FAM58CP-201ENST00000435741 640 ntBASIC19.39■□□□□ 0.69
CALM3P0DP25 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 ACTG1P14-201ENST00000446382 1122 ntBASIC19.39■□□□□ 0.69
CALM3P0DP25 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.39■□□□□ 0.69
CALM3P0DP25 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.39■□□□□ 0.69
CALM3P0DP25 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.39■□□□□ 0.69
CALM3P0DP25 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.39■□□□□ 0.69
CALM3P0DP25 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CALM3P0DP25 GGT3P-204ENST00000453783 1664 ntBASIC19.39■□□□□ 0.69
CALM3P0DP25 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CALM3P0DP25 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CALM3P0DP25 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.39■□□□□ 0.69
CALM3P0DP25 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.39■□□□□ 0.69
CALM3P0DP25 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CALM3P0DP25 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CALM3P0DP25 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CALM3P0DP25 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.38■□□□□ 0.69
CALM3P0DP25 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CALM3P0DP25 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.38■□□□□ 0.69
CALM3P0DP25 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CALM3P0DP25 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.38■□□□□ 0.69
CALM3P0DP25 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.38■□□□□ 0.69
CALM3P0DP25 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.38■□□□□ 0.69
CALM3P0DP25 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.38■□□□□ 0.69
CALM3P0DP25 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.38■□□□□ 0.69
CALM3P0DP25 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.38■□□□□ 0.69
CALM3P0DP25 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 AC099522.2-201ENST00000607001 744 ntBASIC19.38■□□□□ 0.69
CALM3P0DP25 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.38■□□□□ 0.69
CALM3P0DP25 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALM3P0DP25 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms