Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CXCL1P09341 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CXCL1P09341 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL1P09341 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CXCL1P09341 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.03□□□□□ -0.32
CXCL1P09341 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.03□□□□□ -0.32
CXCL1P09341 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL1P09341 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.03□□□□□ -0.32
CXCL1P09341 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CXCL1P09341 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL1P09341 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL1P09341 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL1P09341 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL1P09341 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL1P09341 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL1P09341 AC068587.6-202ENST00000641839 5619 ntBASIC13.02□□□□□ -0.32
CXCL1P09341 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.02□□□□□ -0.32
CXCL1P09341 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL1P09341 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL1P09341 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CXCL1P09341 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL1P09341 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL1P09341 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL1P09341 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL1P09341 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CXCL1P09341 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCL1P09341 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CXCL1P09341 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CXCL1P09341 ID1-201ENST00000376105 1233 ntBASIC13.02□□□□□ -0.33
CXCL1P09341 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCL1P09341 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.02□□□□□ -0.33
CXCL1P09341 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCL1P09341 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.02□□□□□ -0.33
CXCL1P09341 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.02□□□□□ -0.33
CXCL1P09341 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCL1P09341 AC092865.7-201ENST00000641832 219 ntBASIC13.02□□□□□ -0.33
CXCL1P09341 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CXCL1P09341 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCL1P09341 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.02□□□□□ -0.33
CXCL1P09341 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CXCL1P09341 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 KRT89P-201ENST00000620027 1478 ntBASIC13.02□□□□□ -0.33
CXCL1P09341 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCL1P09341 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.02□□□□□ -0.33
CXCL1P09341 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CXCL1P09341 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL1P09341 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
CXCL1P09341 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCL1P09341 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCL1P09341 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CXCL1P09341 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
CXCL1P09341 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.01□□□□□ -0.33
CXCL1P09341 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CXCL1P09341 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CXCL1P09341 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CXCL1P09341 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.01□□□□□ -0.33
CXCL1P09341 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CXCL1P09341 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 MIR935-201ENST00000401179 91 ntBASIC13.01□□□□□ -0.33
CXCL1P09341 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCL1P09341 MIR3917-201ENST00000580971 93 ntBASIC13.01□□□□□ -0.33
CXCL1P09341 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
CXCL1P09341 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL1P09341 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCL1P09341 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CXCL1P09341 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.01□□□□□ -0.33
CXCL1P09341 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms