Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 AL845331.1-201ENST00000424978 1190 ntBASIC13.95□□□□□ -0.18
CTSDP07339 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 NUS1P1-201ENST00000446295 882 ntBASIC13.95□□□□□ -0.18
CTSDP07339 KRT18P38-201ENST00000449496 1282 ntBASIC13.95□□□□□ -0.18
CTSDP07339 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.95□□□□□ -0.18
CTSDP07339 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.95□□□□□ -0.18
CTSDP07339 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.95□□□□□ -0.18
CTSDP07339 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.95□□□□□ -0.18
CTSDP07339 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CTSDP07339 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSDP07339 AC010491.1-201ENST00000563101 2797 ntBASIC13.94□□□□□ -0.18
CTSDP07339 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.94□□□□□ -0.18
CTSDP07339 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.94□□□□□ -0.18
CTSDP07339 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CTSDP07339 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSDP07339 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CTSDP07339 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CTSDP07339 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.94□□□□□ -0.18
CTSDP07339 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CTSDP07339 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.94□□□□□ -0.18
CTSDP07339 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CTSDP07339 SIGLEC30P-201ENST00000455569 941 ntBASIC13.94□□□□□ -0.18
CTSDP07339 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.94□□□□□ -0.18
CTSDP07339 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.94□□□□□ -0.18
CTSDP07339 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CTSDP07339 AC073508.3-201ENST00000619697 1419 ntBASIC13.94□□□□□ -0.18
CTSDP07339 HYMAI.1-201ENST00000620949 238 ntBASIC13.94□□□□□ -0.18
CTSDP07339 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CTSDP07339 AC022532.1-201ENST00000624563 1728 ntBASIC13.94□□□□□ -0.18
CTSDP07339 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSDP07339 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.94□□□□□ -0.18
CTSDP07339 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CTSDP07339 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSDP07339 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSDP07339 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CTSDP07339 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CTSDP07339 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CTSDP07339 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CTSDP07339 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSDP07339 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSDP07339 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.93□□□□□ -0.18
CTSDP07339 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.93□□□□□ -0.18
CTSDP07339 AC090616.6-201ENST00000582640 721 ntBASIC13.93□□□□□ -0.18
CTSDP07339 AC011467.2-201ENST00000598425 242 ntBASIC13.93□□□□□ -0.18
CTSDP07339 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CTSDP07339 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms