Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 AP000347.1-202ENST00000435868 847 ntBASIC16.96■□□□□ 0.31
HLA-DQB2P05538 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 AL513190.1-201ENST00000621254 727 ntBASIC16.96■□□□□ 0.31
HLA-DQB2P05538 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQB2P05538 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
HLA-DQB2P05538 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQB2P05538 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.96■□□□□ 0.3
HLA-DQB2P05538 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.96■□□□□ 0.3
HLA-DQB2P05538 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.96■□□□□ 0.3
HLA-DQB2P05538 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQB2P05538 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 MIR940-201ENST00000401276 94 ntBASIC16.95■□□□□ 0.3
HLA-DQB2P05538 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 AL671883.3-201ENST00000603274 991 ntBASIC16.95■□□□□ 0.3
HLA-DQB2P05538 AC092865.6-201ENST00000642101 219 ntBASIC16.95■□□□□ 0.3
HLA-DQB2P05538 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 PCDHB19P-201ENST00000570871 2371 ntBASIC16.95■□□□□ 0.3
HLA-DQB2P05538 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 OR6D1P-203ENST00000641209 4860 ntBASIC16.95■□□□□ 0.3
HLA-DQB2P05538 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HLA-DQB2P05538 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 MIR574-201ENST00000385209 96 ntBASIC16.94■□□□□ 0.3
HLA-DQB2P05538 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 AL662844.4-201ENST00000606367 2838 ntBASIC16.94■□□□□ 0.3
HLA-DQB2P05538 GPAA1P2-202ENST00000606848 1787 ntBASIC16.94■□□□□ 0.3
HLA-DQB2P05538 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQB2P05538 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms