Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC074386.1-202ENST00000463561 864 ntBASIC17.7■□□□□ 0.42
ZBED1O96006 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.7■□□□□ 0.42
ZBED1O96006 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.7■□□□□ 0.42
ZBED1O96006 AL031432.2-201ENST00000566714 459 ntBASIC17.7■□□□□ 0.42
ZBED1O96006 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.7■□□□□ 0.42
ZBED1O96006 AL928711.1-201ENST00000570165 459 ntBASIC17.7■□□□□ 0.42
ZBED1O96006 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.7■□□□□ 0.42
ZBED1O96006 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.7■□□□□ 0.42
ZBED1O96006 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.7■□□□□ 0.42
ZBED1O96006 AC012569.1-201ENST00000591191 1524 ntBASIC17.7■□□□□ 0.42
ZBED1O96006 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.7■□□□□ 0.42
ZBED1O96006 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZBED1O96006 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZBED1O96006 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.7■□□□□ 0.42
ZBED1O96006 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZBED1O96006 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.7■□□□□ 0.42
ZBED1O96006 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZBED1O96006 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ZBED1O96006 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ZBED1O96006 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ZBED1O96006 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 YBX2P1-201ENST00000394192 760 ntBASIC17.69■□□□□ 0.42
ZBED1O96006 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
ZBED1O96006 MTDHP5-201ENST00000598980 586 ntBASIC17.69■□□□□ 0.42
ZBED1O96006 AC023511.2-201ENST00000618803 211 ntBASIC17.69■□□□□ 0.42
ZBED1O96006 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.69■□□□□ 0.42
ZBED1O96006 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.69■□□□□ 0.42
ZBED1O96006 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ZBED1O96006 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.69■□□□□ 0.42
ZBED1O96006 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZBED1O96006 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.68■□□□□ 0.42
ZBED1O96006 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
ZBED1O96006 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ZBED1O96006 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.68■□□□□ 0.42
ZBED1O96006 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ZBED1O96006 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.68■□□□□ 0.42
ZBED1O96006 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.68■□□□□ 0.42
ZBED1O96006 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.68■□□□□ 0.42
ZBED1O96006 AC092865.5-201ENST00000545435 363 ntBASIC17.68■□□□□ 0.42
ZBED1O96006 AC087641.1-201ENST00000557561 1021 ntBASIC17.68■□□□□ 0.42
ZBED1O96006 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.68■□□□□ 0.42
ZBED1O96006 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.68■□□□□ 0.42
ZBED1O96006 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.68■□□□□ 0.42
ZBED1O96006 MIR4492-201ENST00000581627 80 ntBASIC17.68■□□□□ 0.42
ZBED1O96006 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.68■□□□□ 0.42
ZBED1O96006 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.68■□□□□ 0.42
ZBED1O96006 AP001350.2-201ENST00000625104 1094 ntBASIC17.68■□□□□ 0.42
ZBED1O96006 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
ZBED1O96006 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ZBED1O96006 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.68■□□□□ 0.42
ZBED1O96006 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.68■□□□□ 0.42
ZBED1O96006 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.68■□□□□ 0.42
ZBED1O96006 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZBED1O96006 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.67■□□□□ 0.42
ZBED1O96006 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.67■□□□□ 0.42
ZBED1O96006 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ZBED1O96006 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZBED1O96006 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.67■□□□□ 0.42
ZBED1O96006 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 HMGA1P7-201ENST00000406908 502 ntBASIC17.67■□□□□ 0.42
ZBED1O96006 DNAJB3-201ENST00000446806 729 ntBASIC17.67■□□□□ 0.42
ZBED1O96006 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms