Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.53■□□□□ 0.4
TRUB2O95900 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRUB2O95900 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.52■□□□□ 0.4
TRUB2O95900 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRUB2O95900 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRUB2O95900 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRUB2O95900 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRUB2O95900 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRUB2O95900 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.52■□□□□ 0.4
TRUB2O95900 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRUB2O95900 HMGA1P7-201ENST00000406908 502 ntBASIC17.52■□□□□ 0.4
TRUB2O95900 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRUB2O95900 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
TRUB2O95900 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.52■□□□□ 0.4
TRUB2O95900 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.52■□□□□ 0.4
TRUB2O95900 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.52■□□□□ 0.4
TRUB2O95900 AC002347.1-201ENST00000569543 541 ntBASIC17.52■□□□□ 0.4
TRUB2O95900 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRUB2O95900 CYP2A7P1-201ENST00000595391 815 ntBASIC17.52■□□□□ 0.4
TRUB2O95900 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.52■□□□□ 0.4
TRUB2O95900 AP001350.2-201ENST00000625104 1094 ntBASIC17.52■□□□□ 0.4
TRUB2O95900 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRUB2O95900 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.52■□□□□ 0.4
TRUB2O95900 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRUB2O95900 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.52■□□□□ 0.39
TRUB2O95900 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRUB2O95900 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TRUB2O95900 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRUB2O95900 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRUB2O95900 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRUB2O95900 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRUB2O95900 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.52■□□□□ 0.39
TRUB2O95900 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRUB2O95900 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRUB2O95900 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.51■□□□□ 0.39
TRUB2O95900 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.51■□□□□ 0.39
TRUB2O95900 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.51■□□□□ 0.39
TRUB2O95900 AC074386.1-202ENST00000463561 864 ntBASIC17.51■□□□□ 0.39
TRUB2O95900 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.51■□□□□ 0.39
TRUB2O95900 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.51■□□□□ 0.39
TRUB2O95900 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
TRUB2O95900 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRUB2O95900 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.51■□□□□ 0.39
TRUB2O95900 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.51■□□□□ 0.39
TRUB2O95900 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
TRUB2O95900 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 ALOX12P2-203ENST00000570921 1945 ntBASIC17.51■□□□□ 0.39
TRUB2O95900 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRUB2O95900 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.5■□□□□ 0.39
TRUB2O95900 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 AL671710.1-201ENST00000610245 2349 ntBASIC17.5■□□□□ 0.39
TRUB2O95900 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRUB2O95900 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.5■□□□□ 0.39
TRUB2O95900 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.5■□□□□ 0.39
TRUB2O95900 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.5■□□□□ 0.39
TRUB2O95900 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.5■□□□□ 0.39
TRUB2O95900 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.5■□□□□ 0.39
TRUB2O95900 AC004832.2-201ENST00000426397 482 ntBASIC17.5■□□□□ 0.39
TRUB2O95900 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRUB2O95900 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.5■□□□□ 0.39
TRUB2O95900 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
TRUB2O95900 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TRUB2O95900 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.5■□□□□ 0.39
TRUB2O95900 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRUB2O95900 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.5■□□□□ 0.39
TRUB2O95900 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms