Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.07□□□□□ -0.16
ABCA1O95477 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ABCA1O95477 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.07□□□□□ -0.16
ABCA1O95477 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCA1O95477 TERF1P3-201ENST00000505638 1227 ntBASIC14.07□□□□□ -0.16
ABCA1O95477 AP005018.1-201ENST00000525475 301 ntBASIC14.07□□□□□ -0.16
ABCA1O95477 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.07□□□□□ -0.16
ABCA1O95477 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCA1O95477 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCA1O95477 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ABCA1O95477 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.06□□□□□ -0.16
ABCA1O95477 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 AL645608.8-201ENST00000606034 2086 ntBASIC14.06□□□□□ -0.16
ABCA1O95477 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.06□□□□□ -0.16
ABCA1O95477 UXT-AS1-201ENST00000590504 1525 ntBASIC14.06□□□□□ -0.16
ABCA1O95477 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCA1O95477 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.06□□□□□ -0.16
ABCA1O95477 AC097493.3-201ENST00000509725 367 ntBASIC14.06□□□□□ -0.16
ABCA1O95477 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.06□□□□□ -0.16
ABCA1O95477 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.06□□□□□ -0.16
ABCA1O95477 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 AC080080.1-201ENST00000625121 2420 ntBASIC14.06□□□□□ -0.16
ABCA1O95477 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.06□□□□□ -0.16
ABCA1O95477 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ABCA1O95477 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCA1O95477 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 PCDHA12-202ENST00000613593 2588 ntBASIC14.06□□□□□ -0.16
ABCA1O95477 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ABCA1O95477 AC108860.2-201ENST00000562760 2183 ntBASIC14.06□□□□□ -0.16
ABCA1O95477 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ABCA1O95477 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ABCA1O95477 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ABCA1O95477 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.06□□□□□ -0.16
ABCA1O95477 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.06□□□□□ -0.16
ABCA1O95477 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCA1O95477 WASH6P-202ENST00000359512 1437 ntBASIC14.06□□□□□ -0.16
ABCA1O95477 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCA1O95477 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCA1O95477 LINC00304-203ENST00000565008 1864 ntBASIC14.05□□□□□ -0.16
ABCA1O95477 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCA1O95477 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCA1O95477 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ABCA1O95477 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCA1O95477 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
ABCA1O95477 HMGA1P7-201ENST00000406908 502 ntBASIC14.05□□□□□ -0.16
ABCA1O95477 AL355306.1-201ENST00000415580 579 ntBASIC14.05□□□□□ -0.16
ABCA1O95477 BASP1P1-201ENST00000430708 665 ntBASIC14.05□□□□□ -0.16
ABCA1O95477 IGHV3-71-201ENST00000523324 359 ntBASIC14.05□□□□□ -0.16
ABCA1O95477 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.05□□□□□ -0.16
ABCA1O95477 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ABCA1O95477 RARRES2P8-201ENST00000566335 367 ntBASIC14.05□□□□□ -0.16
ABCA1O95477 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.05□□□□□ -0.16
ABCA1O95477 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.05□□□□□ -0.16
ABCA1O95477 AL009183.1-201ENST00000603760 355 ntBASIC14.05□□□□□ -0.16
ABCA1O95477 AL358472.5-202ENST00000641448 1267 ntBASIC14.05□□□□□ -0.16
ABCA1O95477 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCA1O95477 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCA1O95477 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCA1O95477 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ABCA1O95477 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ABCA1O95477 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms