Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RAPGEF3O95398 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 AL162726.2-201ENST00000438986 1017 ntBASIC24.65■■□□□ 1.54
RAPGEF3O95398 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 FOS-206ENST00000555347 1280 ntTSL 2 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RAPGEF3O95398 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC24.65■■□□□ 1.54
RAPGEF3O95398 AC104581.1-202ENST00000635932 2618 ntBASIC24.65■■□□□ 1.54
RAPGEF3O95398 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RAPGEF3O95398 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
RAPGEF3O95398 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RAPGEF3O95398 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RAPGEF3O95398 MIR663B-201ENST00000408361 115 ntBASIC24.64■■□□□ 1.54
RAPGEF3O95398 VMO1-203ENST00000416307 712 ntTSL 2 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 NME4-207ENST00000450036 985 ntTSL 3 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 KRT8P13-201ENST00000463294 1010 ntBASIC24.64■■□□□ 1.54
RAPGEF3O95398 PTK7-212ENST00000476760 902 ntTSL 2 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RAPGEF3O95398 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC24.64■■□□□ 1.54
RAPGEF3O95398 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
RAPGEF3O95398 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC24.64■■□□□ 1.53
RAPGEF3O95398 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RAPGEF3O95398 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
RAPGEF3O95398 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.53
RAPGEF3O95398 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RAPGEF3O95398 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
RAPGEF3O95398 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RAPGEF3O95398 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RAPGEF3O95398 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RAPGEF3O95398 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RAPGEF3O95398 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RAPGEF3O95398 RPL28-203ENST00000428193 573 ntTSL 2 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 IGHJ2P-201ENST00000454480 60 ntBASIC24.63■■□□□ 1.53
RAPGEF3O95398 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 AP001889.1-201ENST00000525414 633 ntBASIC24.63■■□□□ 1.53
RAPGEF3O95398 RIT1-205ENST00000539040 919 ntTSL 2 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 RPL28-207ENST00000558815 616 ntTSL 2 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RAPGEF3O95398 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 TP73-213ENST00000604479 1623 ntTSL 5 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 AC006277.1-201ENST00000624348 1610 ntBASIC24.63■■□□□ 1.53
RAPGEF3O95398 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RAPGEF3O95398 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RAPGEF3O95398 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RAPGEF3O95398 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RAPGEF3O95398 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RAPGEF3O95398 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC24.62■■□□□ 1.53
RAPGEF3O95398 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
RAPGEF3O95398 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC24.62■■□□□ 1.53
RAPGEF3O95398 MGST3-203ENST00000367885 680 ntTSL 2 BASIC24.62■■□□□ 1.53
RAPGEF3O95398 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms